INNV
Lab180 Srpski

English
Početak Istraživanja MPNTR Istraživačka tema Projekti Fonda za nauku Publikacije Bioinformatički alati MethSpec TRI_tool IDPpi_tool HP-GAS DiNGO EpiMut Zaposleni Kontakt Vesti

Publikacije

 

2024

 

  1. Marić S, Jocić A, Tekić D, Mušović J, Milićević J, Dimitrijević A. Customizable Choline-based Aqueous Biphasic Systems as Ecofriendly Extraction Platform for Removal of Pesticide from Wastewaters. Separation and Purification Technology 340 (2024) 126609. DOI: 10.1016/j.seppur.2024.126609.
  2. Protić S, Crnoglavac Popović M, Kaličanin N, Prodanović O, Senćanski M, Milićević J, Stevanović K, Perović V, Paessler S, Prodanović R, Glišić S. SARS-CoV-2 PLpro Inhibition: Evaluating in Silico Repurposed Fidaxomicin's Antiviral Activity Through In Vitro Assessment. Chemistry Open e202400091. DOI: 10.1002/open.202400091. PMID: 39099532.
  3. Perovic V, Glisic S, Veljkovic M, Paessler S, Veljkovic V. In Silico Exploration of CD200 as a Therapeutic Target for COVID-19. Microorganisms 12(6):1185. DOI: 10.3390/microorganisms12061185. PMID: 38930566.
  4. Perovic V, Stevanovic K, Bukreyeva N, Paessler S, Maruyama J, López-Serrano S, Darji A, Sencanski M, Radosevic D, Berardozzi S, Botta B, Mori M, Glisic S. Exploring the Antiviral Potential of Natural Compounds against Influenza: A Combined Computational and Experimental Approach. International Journal of Molecular Sciences 25(9):4911. DOI: 10.3390/ijms25094911. PMID: 38732151.
  5. Sencanski M, Glisic S, Kubale V, Cotman M, Mavri J, Vrecl M. Computational Modeling and Characterization of Peptides Derived from Nanobody Complementary-Determining Region 2 (CDR2) Targeting Active-State Conformation of the β2 - Adrenergic Receptor (β2AR). Biomolecules 14(4):423. DOI: 10.3390/biom14040423.
  6. Nešić MD, Dučić T, Gemović B, Senćanski M, Algarra M, Gonçalves M, Stepić M, Popović IA, Kapuran Đ, Petković M. Prediction of Protein Targets in Ovarian Cancer Using a Ru-Complex and Carbon Dot Drug Delivery Therapeutic Nanosystems: A Bioinformatics and µ-FTIR Spectroscopy Approach. Pharmaceutics 16(8):997. DOI: 10.3390/pharmaceutics16080997. PMID: 39204341.
  7. Milićević J, Petrović S, Tošić S, Vrecl M, Arsić B. Recent Computer-Aided Studies on Herbicides: A Short Review. Chem Biodivers e202400531. DOI: 10.1002/cbdv.202400531. PMID: 38948948.
  8. Dopsaj M, Tan W, Perovic V, Stajic Z, Milosavljevic N, Paessler S, Makishima T. Novel neurodigital interface reduces motion sickness in virtual reality. Neuroscience Letters. 825:137692. DOI: 10.1016/j.neulet.2024.137692.
  9. Matejin S, Gregoric ID, Radovancevic R, Paessler S, Perovic V. Risk stratification and prediction of severity of COVID-19 infection in patients with preexisting cardiovascular disease. Frontiers in Microbiology. 15:1422393. DOI: 10.3389/fmicb.2024.1422393.

 

2023

 

  1. Arsić B, Petrović S, Mrmošanin J, Dimitrijević I, Tošić S, Stojanović G, Glišić S, Milićević J. Stability and computational analyses of selected pesticides in use in the Republic of Serbia. J. Serb. Chem. Soc. (2023) 12490. doi: 10.2298/JSC230714102A.
  2. Petrović S, Arsić B, Zlatanović I, Milićević J, Glišić S, Mitić M, Đurović-Pejčev R, Stojanović G. In Silico Investigation of Selected Pesticides and Their Determination in Agricultural Products Using QuEChERS Methodology and HPLC-DAD. Int J Mol Sci. 2023 Apr 28;24(9):8003. doi: 10.3390/ijms24098003.
  3. Mavri M, Glišić S, Senćanski M, Vrecl M, Rosenkilde MM, Spiess K, Kubale V. Patterns of human and porcine gammaherpesvirus-encoded BILF1 receptor endocytosis. Cell Mol Biol Lett. 2023 Feb 21;28(1):14, DOI: 10.1186/s11658-023-00427-y.
  4. Protić S, Kaličanin N, Sencanski M, Prodanović O, Milicevic J, Perovic V, Paessler S, Prodanović R, Glisic S. In Silico and In Vitro Inhibition of SARS-CoV-2 PLpro with Gramicidin D. Int J Mol Sci. 2023 Jan 19;24(3):1955, DOI: 10.3390/ijms24031955.
  5. Đukić I, Kaličanin N, Sencanski M, Pajovic SB, Milicevic J, Prljic J, Paessler S, Prodanović R, Glisic S. Inhibition of SARS-CoV-2 Mpro with Vitamin C, L-Arginine and a Vitamin C/L-Arginine Combination. Front Biosci (Landmark Ed). 2023 Jan 13;28(1):8, DOI: 10.31083/j.fbl2801008.

 

2022

 

  1. Mitrović Rajić A., Milićević J, Grbović Novaković J. Development of modified pyrophyllite carbon paste electrode for carbendazim. Materials and Manufacturing Processes 2022 Oct, DOI: 10.1080/10426914.2022.2136386.
  2. Arsic B, Barber J, Cikos A, Kadirvel M, Kostic E, McBain A, Milicevic J, Oates A, Regan A. Computational Studies on Selected Macrolides Active against Escherichia coli Combined with the NMR Study of Tylosin A in Deuterated Chloroform. Molecules. 2022 Oct; 27(21):7280.
  3. M, Bonello J, Fernández-Breis JT, Bucher P, Futschik ME, Gaudet P, Kulakovskiy IV, Licata L, Logie C, Lovering RC, Makeev VJ, Orchard S, Panni S, Perfetto L, Sant D, Schulz S, Vercruysse S, Zerbino DR, Lægreid A. GRECO Consortium. The gene regulation knowledge commons: the action area of GREEKC. Biochim Biophys Acta Gene Regul Mech. 2022 Jan;1865(1):194768.
  4. Veljković V, Glišić S, Perović V, Veljković M, Paessler S. Simple Theoretical Criterion for Selection of Natural Compounds with Anti-COVID-19 Activity. Frontiers in Bioscience-Landmark. 2022;27(5):152.
  5. Bojić T, Sencanski M, Perovic V, Milicevic J, Glisic S. In Silico Screening of Natural Compounds for Candidates 5HT6 Receptor Antagonists against Alzheimer’s Disease. Molecules. 2022 Apr 19;27(9):2626.
  6. Sencanski M, Perovic V, Milicevic J, Todorovic T, Prodanovic R, Veljkovic V, Paessler S, Glisic S. Identification of SARS‐CoV‐2 Papain‐like Protease (PLpro) Inhibitors Using Combined Computational Approach. ChemistryOpen. 2022 Feb;11(2):e202100248.

 

2021

 

  1. Momčilović M, Milićević J, Ranđelović M. Recent advances in electrochemical determination of pesticides. Journal of Nanoscience and Nanotechnology, 2021 Dec; 21(12):5795.
  2. Stanišić MD, Popović Kokar N, Ristić P, Balaž AM, Senćanski M, Ognjanović M, Đokić VR, Prodanović R, Todorović TR. Chemical modification of glycoproteins’ carbohydrate moiety as a general strategy for the synthesis of efficient biocatalysts by biomimetic mineralization: The case of glucose oxidase. Polymers. 2021 Nov 10;13(22):3875.
  3. Drljaca T, Zukic B, Kovacevic V, Gemovic B, Klaassen-Ljubicic K, Perovic V, Lazarevic M, Pavlovic S, Veljkovic N. The first insight into the genetic structure of the population of modern Serbia. Sci Rep. 2021 Jul 7;11(1):13995.
  4. Milin-Lazovic J, Madzarevic P, Rajovic N, Djordjevic V, Milic N, Pavlovic S, Veljkovic N, Milic NM, Radenkovic D. Meta-Analysis of Circulating Cell-Free DNA's Role in the Prognosis of Pancreatic Cancer. Cancers (Basel). 2021 Jul 6;13(14):3378.
  5. Quaglia F, Mészáros B, Salladini E, et al. DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation. Nucleic Acids Res. 2021 Nov 25:gkab1082.
  6. Glumac S, Davidovic R, Dozic B, Hinic S, Pavlovic I, Drakulic D, Todorović A, Pavlovic MM, Skodric SR, Baralic I, Sopta J, Pejic S. Immunohistochemical expression of cyclin-dependent kinase inhibitors p16 and p57 in rhabdomyosarcoma. Pathol Res Pract. 2021 Sep;225:153558.
  7. Gemovic B, Perovic V, Davidovic R, Drljaca T, Veljkovic N Alignment-free method for functional annotation of amino acid substitutions: Application on epigenetic factors involved in hematologic malignancies. Plos one. 2021 Jan 4;16(1):e0244948

 

2020

 

  1. Glisic S, Perovic VR, Sencanski M, Paessler S, Veljkovic V. The Biological Rationale for the Repurposing of BCG Vaccine against SARS-CoV-2. Journal of Proteome Research. 2020 Aug 28. doi:10.1021/acs.jproteome.0c00410
  2. Sencanski M, Perovic V, Pajovic SB, Adzic M, Paessler S, Glisic S. Drug Repurposing for Candidate SARS-CoV-2 Main Protease Inhibitors by a Novel in Silico Method. Molecules. 2020 Aug;25(17):3830.
  3. Veljkovic V, Perovic V, Paessler S. Prediction of the effectiveness of COVID-19 vaccine candidates. F1000Research. 2020 May 14;9(365):365
  4. Perovic V, Leclercq JY, Sumonja N, Richard FD, Veljkovic N, Kajava AV. Tally-2.0: upgraded validator of tandem repeat detection in protein sequences. Bioinformatics. 2020 May 1;36(10):3260-2.
  5. Matejin S, Bukreyeva N, Radosevic D, Sencanski M, Mantlo E, Veljkovic V, Glisic S, Paessler S. In vitro anti-influenza activity of in silico repurposed candidate drug cycrimine. Antiviral therapy. 2020 Feb 28.
  6. Blagotinšek Cokan K, Mavri M, Rutland CS, Glišić S, Senćanski M, Vrecl M, Kubale V. Critical Impact of Different Conserved Endoplasmic Retention Motifs and Dopamine Receptor Interacting Proteins (DRIPs) on Intracellular Localization and Trafficking of the D2 Dopamine Receptor (D2-R) Isoforms. Biomolecules. 2020 Oct;10(10):1355.
  7. Bondžić AM, Senćanski MV, Nikezić AV, Kirillova MV, André V, Kirillov AM, Bondžić BP. Aminoalcoholate-driven tetracopper (II) cores as dual acetyl and butyrylcholinesterase inhibitors: Experimental and theoretical elucidation of mechanism of action. Journal of inorganic biochemistry. 2020 Apr 1;205:110990.
  8. Isca V, Sencanski M, Filipovic N, Dos Santos DJ, Čipak Gašparović A, Saraíva L, Afonso CA, Rijo P, García-Sosa AT. Activity to breast cancer cell lines of different malignancy and predicted interaction with protein kinase C isoforms of royleanones. International Journal of Molecular Sciences. 2020 Jan;21(10):3671.
  9. Filipović NR, Bjelogrlić SK, Pelliccia S, Jovanović VB, Kojić M, Senćanski M, La Regina G, Silvestri R, Muller CD, Todorović TR. Selenotriapine–An isostere of the most studied thiosemicarbazone with pronounced pro-apoptotic activity, low toxicity and ability to challenge phenotype reprogramming of 3-D mammary adenocarcinoma tumors. Arabian Journal of Chemistry. 2020 Jan 1;13(1):1466-89.
  10. Milićević JS, Ranđelović MS, Momčilović MZ, Zarubica AR, Mofarah SS, Matović B, Sorrel CC. Multiwalled carbon nanotubes modified with MoO 2 nanoparticles for voltammetric determination of the pesticide oxyfluorfen. Microchimica Acta. 2020 Aug;187(8):1-8.
  11. Dimitrijević A, Мilićević J, Jocić A, Marić S, Trtić-Petrović T, Papović S, Tot A, Gadžurić S, Vraneš M. Further insight into the influence of functionalization and positional isomerism of pyridinium ionic liquids on the aqueous two-phase system equilibria. Fluid Phase Equilibria. 2020 May 15;512:112520.

 

2019

 

  1. Jovanović M, Zhukovsky D, Podolski-Renić A, Domračeva I, Žalubovskis R, Senćanski M, Glišić S, Sharoyko V, Tennikova T, Dar'in D, Pešić M, Krasavin M. Novel electrophilic amides amenable by the Ugi reaction perturb thioredoxin system via thioredoxin reductase 1 (TrxR1) inhibition: Identification of DVD-445 as a new lead compound for anticancer therapy. Eur J Med Chem. 2019 Nov 1;181:111580.
  2. Veljkovic N. Recent In Silico Resources for Drug Design and Discovery. Curr Med Chem. 2019;26(21):3836-3837.
  3. Zhou N, Jiang Y, Bergquist TR et al. The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens. Genom Biol. 2019; doi: 10.1186/s13059-019-1835-8.
  4. Ranđelović MS, Momčilović MZ, Milićević JS, Đurović Pejčev RD, Mofarah SS, Sorrel CC. Voltammetric sensor based on Pt nanoparticles suported MWCNT for determination of pesticide clomazone in water samples. Journal of the Taiwan Institute of Chemical Engineers. 2019; doi: 10.1016/j.jtice.2019.10.013.
  5. Davidović R, Perovic V, Gemovic B, Veljkovic N. DiNGO: standalone application for Gene Ontology and Human Phenotype Ontology term enrichment analysis. Bioinformatics. 2019; doi: 10.1093/bioinformatics/btz836.
  6. Sencanski M, Glisic S, Šnajder M, Veljkovic N, Poklar Ulrih N, Mavri J, Vrecl M. Computational design and characterization of nanobody-derived peptides that stabilize the active conformation of the β2-adrenergic receptor (β2-AR). Sci Rep. 2019; doi: 10.1038/s41598-019-52934-8.
  7. Hatos A, Hajdu-Soltész B, Monzon AM. DisProt: intrisic protein disorder annotation in 2020. Nucleic Acids Res. Database Issue, 2020. In Press.
  8. Bjelogrlic SK, Todorović TR, Kojic M, Sencanski M, Nikolic M, Visnjevac A, Araskov J, Miljkovic M, Muller CD, Filipovic NR. Pd (II) complexes with N-heteroaromatic hydrazone ligands: Anticancer activity, in silico and experimental target identification. Journal of Inorganic Biochemistry. 2019 Jun 26:110758.
  9. Stevanovic S, Sencanski M, Danel M, Menendez C, Belguedj R, Bouraiou A, Nikolic K, Cojean S, Loiseau PM, Glisic S, Baltas M. Synthesis, In Silico, and In Vitro Evaluation of Anti-Leishmanial Activity of Oxadiazoles and Indolizine Containing Compounds Flagged against Anti-Targets. Molecules. 2019 Jan;24(7):1282.
  10. Susec M, Sencanski M, Glisic S, Veljkovic N, Pedersen C, Drinovec L, Stojan J, Nohr J, Vrecl M. Functional characterization of β2-adrenergic and insulin receptor heteromers. Neuropharmacology. 2019 Jan 29.
  11. Radosevic D, Sencanski M, Perovic VR, Veljkovic N, Prljic J, Veljkovic V, Mantlo E, Bukreyeva N, Paessler S, Glisic S. Virtual Screen for Repurposing of Drugs for Candidate Influenza a M2 Ion-Channel Inhibitors. Frontiers in Cellular and Infection Microbiology. 2019;9:67.
  12. Sistere-Oro M, Vergara-Alert J, Stratmann T, Lopez-Serrano S, Pina-Pedrero S, Cordoba L, Perez-Maillo M, Pleguezuelos P, Vidal E, Veljkovic V, Segales J. Conserved HA-peptide NG34 formulated in pCMV-CTLA4-Ig reduces viral shedding in pigs after a heterosubtypic influenza virus SwH3N2 challenge. PloS one. 2019 Mar 1;14(3):e0212431.
  13. Sumonja N, Gemovic B, Veljkovic N, Perovic V. Automated feature engineering improves prediction of protein–protein interactions. Amino Acids. 2019; doi:10.1007/s00726-019-02756-9.
  14. Gemovic B, Sumonja N, Davidovic R, Perovic V, Veljkovic N. Mapping of Protein-Protein Interactions: Web-Based Resources for Revealing Interactomes. Curr Med Chem. 2019;26(21):3890-3910.

 

2018

 

  1. Veljkovic N, Zaric B, Djuric I, Obradovic M, Sudar-Milovanovic E, Radak D, Isenovic E. Genetic Markers for Coronary Artery Disease. Medicina (Kaunas). 2018; 54(3):36.
  2. Milivojevic D, Sumonja N, Medic S, Pavic A, Moric I, Vasiljevic B, Senerovic L, Nikodinovic-Runic J. Biofilm-forming ability and infection potential of Pseudomonas aeruginosa strains isolated from animals and humans. Pathogens and disease. 2018; 76(4):fty041.
  3. Stevanović S, Perdih A, Senćanski M, Glišić S, Duarte M, Tomás AM, Sena FV, Sousa FM, Pereira MM, Solmajer T. In Silico Discovery of a Substituted 6-Methoxy-quinalidine with Leishmanicidal Activity in Leishmania infantum. Molecules. 2018; 23(4):772. doi: 10.3390/molecules23040772.
  4. Glisic S, Veljkovic V. Chapter 9 - Design of targeting peptides for nanodrugs for treatment of infectious diseases and cancer. Editor(s): Alexandru Mihai Grumezescu, Drug Targeting and Stimuli Sensitive Drug Delivery Systems, William Andrew Publishing. 2018; Pages 343-381. doi: 10.1016/B978-0-12-813689-8.00009-4.
  5. Perovic V, Sumonja N, Marsh L, Radovanovic S, Vukicevic M, Roberts S, Veljkovic N. IDPpi: Protein-Protein Interaction Analyses of Human Intrinsically Disordered Proteins. Scientific Reports. 2018; doi: 10.1038/s41598-018-28815-x.
  6. Paessler S, Huang C, Sencanski M, Veljkovic N, Perovic V, Glisic S, Veljkovic V. Ibuprofen as a template molecule for drug design against Ebola virus. Frontiers in bioscience (Landmark edition). 2018; 23:947-953.

 

2017

 

  1. Filipović NR, Bjelogrlić SK, Pelliccia S, Jovanović VB, Kojić M, Senćanski M, La Regina G, Silvestri R, Muller CD, Todorović TR. Selenotriapine – An isostere of the most studied thiosemicarbazone with pronounced pro-apoptotic activity, low toxicity and ability to challenge phenotype reprogramming of 3-D mammary adenocarcinoma tumors. Arabian Journal of Chemistry. 2017; doi: 10.1016/j.arabjc.2017.11.017.
  2. Bojic T, Perovic VR, Sencanski M, Glisic S. Identification of Candidate Allosteric Modulators of the M1 Muscarinic Acetylcholine Receptor Which May Improve Vagus Nerve Stimulation in Chronic Tinnitus. Frontiers in neuroscience. 2017; 11:636.
  3. Perovic V, Gemovic B, Veljkovic V, Glisic S, Veljkovic N. Annotation of the functional impact of coding genetic variants. Biologia Serbica. 2017; 39(1).
  4. Sencanski M, Djordjevic I, Grubisic S. Assessing the Dispersive and Electrostatic Components of the Selenium - Aromatic Interaction Energy by DFT. J Mol Model. 2017; 23(5):162.
  5. Piovesan D, Tabaro F, Micetic I, et al. DisProt 7.0: a major update of the database of disordered proteins. Nucleic Acids Res. 2017; 45(D1):D219-27.
  6. Perovic V, Sumonja N, Gemovic B, Toska E, Roberts SG, Veljkovic N. TRI_tool: a web-tool for prediction of protein-protein interactions in human transcriptional regulation. Bioinformatics. 2017; 33(2):289-91.

 

2016

 

  1. Veljkovic V, Glisic S, Perovic V, Paessler S, Veljkovic N, Nicolson GL. Simple Chemoinformatics Criterion Using Electron Donor-Acceptor Molecular Characteristics for Selection of Antibiotics Against Multi-Drug-Resistant Bacteria. Discoveries 2016; 4(3): e64 DOI: 10.15190/d.2016.11.
  2. Veljkovic V, Veljkovic N, Paessler S, Goeijenbier M, Perovic V, Glisic S, Muller CP. Predicted enhanced human propensity of current avian-like H1N1 swine influenza virus from China. PLoS One. 2016; 11(11):e0165451.
  3. Jiang Y., Oron T., Clarck W.T. et al. An expanded evaluation of protein function prediction methods shows an improvement in accuracy. Genome Biol. 2016;17(1):184.
  4. Vucicevic J, Srdic-Rajic T, Pieroni M, Laurila JM, Perovic V, Tassini S, Azzali E, Costantino G, Glisic S, Agbaba D, Scheinin M, Nikolic K, Radi M, Veljkovic N. A combined ligand- and structure-based approach for the identification of rilmenidine-derived compounds which synergize the antitumor effects of doxorubicin. Bioorg Med Chem. 2016;24(14):3174-83.
  5. Glisic S, Radosevic D, Perovic V, Sumonja N, Gemovic B, Veljkovic N, Dopsaj M. Role of genetic markers in sport and recreational physical activity. Physical Culture. 2016; 70(1), 5-13.
  6. Jovanovic-Cupic S, Glisic S, Stanojevic M, Nozic D, Petrovic N, Mandusic V, Krajnovic M. The influence of host factors and sequence variability of the p7 region on the response to pegylated interferon/ribavirin therapy for chronic hepatitis C genotype 1b in patients from Serbia. Arch Virol. 2016;161(5):1189-98.
  7. Glisic S, Sencanski M, Perovic V, Stevanovic S, García-Sosa AT. Arginase Flavonoid Anti-Leishmanial in Silico Inhibitors Flagged against Anti-Targets. Molecules. 2016; 5;21(5).
  8. Glišić S, Cavanaugh DP, Chittur KK, Sencanski M, Perovic V, Bojić T. Common molecular mechanism of the hepatic lesion and the cardiac parasympathetic regulation in chronic hepatitis C infection: a critical role for the muscarinic receptor type 3. BMC Bioinformatics. 2016; 22;17:139. doi:10.1186/s12859-016- 0988-7.
  9. Srdic-Rajic T, Nikolic K, Cavic M, Djokic I, Gemovic B, Perovic V, Veljkovic N. Rilmenidine suppresses proliferation and promotes apoptosis via the mitochondrial pathway in human leukemic K562 cells. Eur J Pharm Sci. 2016; 1;81:172-80.
  10. Bojic T, Perovic V, Glisic S. In silico therapeutics for neurogenic hypertension and vasovagal syncope. Front. Neurosci. 2016; 9:520. doi: 10.3389/fnins.2015.00520
  11. Filipović NR, Bjelogrlić S, Portalone G, Pelliccia S, Silvestri R, Klisurić O, Senćanski M, Stanković D, Todorović T, Muller CD. Pro-apoptotic and pro-differentiation induction by 8- quinolinecarboxaldehyde selenosemicarbazone and its Co(III) complex in human cancer cell lines. Medicinal Chemistry Communication 2016, doi: 10.1039/C6MD00199H
  12. Fábián B, Senćanski M, Cvijetić I, Jedlovszky P, Horvai G. Dynamics of the Water Molecules at the Intrinsic Liquid Surface as Seen from Molecular Dynamics Simulation and ITIM Analysis. The Journal of Physical Chemistry C 2016; 120(16) doi: 10.1021/acs.jpcc.5b10370
  13. Sencanski M, Došen-Mićović L. Importance of Inter-Residue Interactions in Ligand-Receptor Binding. Chemical Papers 2016; 70(5):1-9

 

2015

 

  1. Veljkovic V, Paessler S, Glisic S, Prljic J, Perovic V, Veljkovic N, Scotch M. Evolution of 2014/15 H3N2 influenza viruses circulating in US: consequences for vaccine effectiveness and possible new pandemic. Front. Microbiol. doi: 10.3389/fmicb.2015.01456
  2. Sencanski M, Došen-Mićović L, Sukalovic V, Kostic-Rajacic S. Theoretical insight into sulfur–aromatic interactions with extension to D2 receptor activation mechanism. Structural Chemistry 08/2015; 26(4). doi:10.1007/s11224-015-0574-z
  3. Filipovic N, Bjelogrlic S, Marinkovic A, Verbic T, Cvijetic I, Sencanski M, Rodic M, Vujcic M, Sladic D, Strikovic Z, Todorovic T, Muller C. Zn(II) complex with 2-quinolinecarboxaldehyde selenosemicarbazone: synthesis, structure, interaction studies with DNA/HSA, molecular docking and caspase-8 and -9 independent apoptose induction. RSC Advances 01/2015; doi:10.1039/C5RA19849F
  4. Sencanski M, Radosevic D, Perovic V, Gemovic B, Stanojevic M, Veljkovic N, Glisic S. Natural productsas promising therapeutics for treatment of influenza disease. Curr Pharm Des. 2015; 21(38):5573-88
  5. Glisic S, Paessler S, Veljkovic N, Perovic VR, Prljic J, Veljkovic V. Improving attrition rates in Ebola virus drug discovery. Expert Opin Drug Discov. 2015; 30:1-8.
  6. Schmier S, Mostafa A, Haarmann T, Bannert N, Ziebuhr J, Veljkovic V, Dietrich U, Pleschka S. In Silico Prediction and Experimental Confirmation of HA Residues Conferring Enhanced Human Receptor Specificity of H5N1 Influenza A Viruses. Sci Rep. 2015; 5:11434.
  7. Veljkovic V, Goeijenbier M, Glisic S, Veljkovic N, Perovic VR, Sencanski M, Branch DR, Paessler S. In silico analysis suggests repurposing of ibuprofen for prevention and treatment of EBOLA virus disease. F1000Res. 2015; 4:104. doi:10.12688/f1000research.6436.1. eCollection 2015.
  8. Veljkovic N, Vucicevic J, Tassini S, Glisic S, Veljkovic V, Radi M. The preclinical discovery and development of maraviroc for the treatment of HIV. Expert Opin Drug Discov. 2015. doi:10.1517/17460441.2015.1041497.
  9. Veljkovic V, Glisic S, Muller CP, Scotch M, Branch DR, Perovic VR, Sencanski M, Veljkovic N, Colombatti A. In silico analysis suggests interaction between Ebola virus and the extracellular matrix. Frontiers in Microbiology. 2015. 6:135. doi:10.3389/fmicb.2015.00135.
  10. Veljkovic V, Loiseau PM, Figadere B, Glisic S, Veljkovic N, Perovic VR, Cavanaugh DP, Branch DR. Virtual screen for repurposing approved and experimental drugs for candidate inhibitors of EBOLA virus infection. F1000Research. 2015. 4:34. doi:10.12688/f1000research.6110.1.
  11. Zivković M, Djurić T, Stojković L, Jovanović I, Končar I, Davidović L, Veljković N, Alavantić D, Stanković A. CXCL16 Haplotypes in Patients with Human Carotid Atherosclerosis: Preliminary Results. J Atheroscler Thromb. 2015. 22(1):10-20.

 

2014

 

  1. Mandic M, Drinovec L, Glisic S, Veljkovic N, Nohr J, Vrecl M. Demonstration of a direct interaction between β2-adrenergic receptor and insulin receptor by BRET and bioinformatics. PLoS One. 9(11):e112664. doi:10.1371/journal.pone.0112664. eCollection 2014.
  2. Veljkovic V , Glisic S, Veljkovic N, Bojic T, Dietrich U, Perovic VR, Colombatti A. Influenza vaccine as prevention for cardiovascular diseases: Possible molecular mechanism. Vaccine. 2014. pii: S0264-410X(14)00933-5.
  3. Vujicic AD, Gemovic B, Veljkovic V, Glisic S, Veljkovic N. Natural autoantibodies in healthy neonatals recognizing a peptide derived from the second conserved region of HIV-1 gp120. Vojnosanit Pregl. 2014. 71(4):352-61.

 

2013

 

  1. Perovic VR, Muller CP, Niman HL, Veljkovic N, Dietrich U, Tosic DD, Glisic S, Veljkovic V. Novel phylogenetic algorithm to monitor human tropism in Egyptian H5N1-HPAIV reveals evolution toward efficient human-to-human transmission. PLoS One. 2013. 26;8(4):e61572.
  2. Maga G, Veljkovic N, Crespan E, Spadari S, Prljic J, Perovic V, Glisic S, Veljkovic V. New in silico and conventional in vitro approaches to advance HIV drug discovery and design. Expert Opin Drug Discov. 2013. 8(1):83-92.
  3. Gemovic B, Perovic V, Glisic S, Veljkovic N. Feature-based classification of amino acid substitutions outside conserved functional protein domains. ScientificWorldJournal. 2013. 17;2013:948617.
  4. Nikolic K, Veljkovic N, Gemovic B, Srdic-Rajic T, Agbaba D. Imidazoline-1 receptor ligands as apoptotic agents: pharmacophore modeling and virtual docking study. Comb Chem High Throughput Screen. 2013. 16(4):298-319.
  5. Veljkovic N, Glisic S, Prljic J, Perovic V, Veljkovic V. Simple and general criterion for "in silico" screening of candidate HIV drugs. Curr Pharm Biotechnol. 2013. 14(5):561-9.
  6. Perovic VR. Novel algorithm for phylogenetic analysis of proteins: application to analysis of the evolution of H5N1 influenza viruses. J Math Chem. 2013. 51(8):2238-55.

 

2012

 

  1. Vergara-Alert J, Argilaguet JM, Busquets N, Ballester M, Martín-Valls GE, Rivas R, López-Soria S, Solanes D, Majó N, Segalés J, Veljkovic V, Rodríguez F, Darji A. Conserved synthetic peptides from the hemagglutinin of influenza viruses induce broad humoral and T-cell responses in a pig model. PLoS One. 2012. 7(7):e40524.
  2. Glisic S, Veljkovic N, Jovanovic Cupic S, Vasiljevic N, Prljic J, Gemovic B, Perovic V, Veljkovic V. Assessment of hepatitis C virus protein sequences with regard to interferon/ribavirin combination therapy response in patients with HCV genotype 1b. Protein J. 2012. 31(2):129-36.
  3. Mancini M, Veljkovic N, Leo E, Aluigi M, Borsi E, Galloni C, Iacobucci I, Barbieri E, Santucci MA. Cytoplasmatic compartmentalization by Bcr-Abl promotes TET2 loss-of-function in chronic myeloid leukemia. J Cell Biochem. 2012. 113(8):2765-74.
  4. Stojković L, Djurić T, Stanković A, Dinčić E, Stančić O, Veljković N, Alavantić D, Zivković M. The association of V249I and T280M fractalkine receptor haplotypes with disease course of multiple sclerosis. J Neuroimmunol. 2012. 245(1-2):87-92.

 

2011

 

  1. Veljkovic N, Glisic S, Perovic V, Veljkovic V. The role of long-range intermolecular interactions in discovery of new drugs. Expert Opin Drug Discov. 2011. 6(12):1263-70.
  2. Veljkovic M, Dopsaj V, Dopsaj M, Branch DR, Veljkovic N, Sakarellos-Daitsiotis MM, Veljkovic V, Glisic S, Colombatti A. Physical activity and natural anti-VIP antibodies: potential role in breast and prostate cancer therapy. PLoS One. 2011. 6(11):e28304.
  3. Veljkovic M, Branch DR, Dopsaj V, Veljkovic V, Veljkovic N, Glisic S, Colombatti A. Can natural antibodies to VIP or VIP-like HIV-1 glycoprotein facilitate prevention and supportive treatment of breast cancer?  Med Hypotheses. 2011. 77(3):404-8.
  4. Vasiljevic N, Veljkovic N, Kosec T, Ma XZ, Glisic S, Prljic J, Vujicic AD, Markovic L, Branch DR. A bioinformatics approach to identify natural autoantibodies from healthy blood donors' sera reactive with the HCV NS5A-derived peptide by immunoassay. Viral Immunol. 2011. 24(2):69-76.

 

2010

 

  1. Tintori C, Veljkovic N, Veljkovic V, Botta M. Computational studies of the interaction between the HIV-1 integrase tetramer and the cofactor LEDGF/p75: insights from molecular dynamics simulations and the informational spectrum method. Proteins. 2010. 78(16):3396-408.
  2. Veljkovic M, Dopsaj V, Stringer WW, Sakarellos-Daitsiotis M, Zevgiti S, Veljkovic V, Glisic S, Dopsaj M. Aerobic exercise training as a potential source of natural antibodies protective against human immunodeficiency virus-1. Scand J Med Sci Sports. 2010. 20(3):469-74.

 

Pre 2010

 

  1. Veljkovic V, Veljkovic N, Muller CP, Müller S, Glisic S, Perovic V, Köhler H. Characterization of conserved properties of hemagglutinin of H5N1 and human influenza viruses: possible consequences for therapy and infection control. BMC Struct Biol. 2009. 9:21.
  2. Veljkovic V, Niman HL, Glisic S, Veljkovic N, Perovic V, Muller CP. Identification of hemagglutinin structural domain and polymorphisms which may modulate swine H1N1 interactions with human receptor. BMC Struct Biol. 2009. 9:62.
  3. Mancini M, Veljkovic N, Corradi V, Zuffa E, Corrado P, Pagnotta E, Martinelli G, Barbieri E, Santucci MA. 14-3-3 ligand prevents nuclear import of c-ABL protein in chronic myeloid leukemia. Traffic. 2009. 10(6):637-47.
  4. Veljkovic N, Glisic S, Prljic J, Perovic V, Botta M, Veljkovic V. Discovery of new therapeutic targets by the informational spectrum method. Curr Protein Pept Sci. 2008. 9(5):493-506.
  5. Mancini M, Zuffa E, Veljkovic N, Brusa G, Corrado P, Corradi V, Martinelli G, Barbieri E, Santucci MA. IPO-trimethylation of histone H3-lysine9 associated with P210 BCR-ABL tyrosine kinase of chronic myeloid leukaemia. Br J Haematol. 2008. 141(6):899-902.
  6. Veljkovic V, Veljkovic N, Glisic S, Ho MW. AIDS vaccine: efficacy, safety and ethics. Vaccine. 2008. 6;26(24):3072-7.
  7. Doliana R, Veljkovic V, Prljic J, Veljkovic N, De Lorenzo E, Mongiat M, Ligresti G, Marastoni S, Colombatti A. EMILINs interact with anthrax protective antigen and inhibit toxin action in vitro. Matrix Biol. 2008. 27(2):96-106.
  8. Glisic S, Arrigo P, Alavantic D, Perovic V, Prljic J, Veljkovic N. Lipoprotein lipase: A bioinformatics criterion for assessment of mutations as a risk factor for cardiovascular disease. Proteins. 2008. 15;70(3):855-62.
  9. Mugnaini C, Rajamaki S, Tintori C, Corelli F, Massa S, Witvrouw M, Debyser Z, Veljkovic V, Botta M. Toward novel HIV-1 integrase binding inhibitors: molecular modeling, synthesis, and biological studies. Bioorg Med Chem Lett. 2007. 17(19):5370-3.
  10. Tintori C, Manetti F, Veljkovic N, Perovic V, Vercammen J, Hayes S, Massa S, Witvrouw M, Debyser Z, Veljkovic V, Botta M. Novel virtual screening protocol based on the combined use of molecular modeling and electron-ion interaction potential techniques to design HIV-1 integrase inhibitors. J Chem Inf Model. 2007. 47(4):1536-44.
  11. Metlas R, Srdic T, Veljkovic V. Anti-IgG antibodies from sera of healthy individuals neutralize HIV-1 primary isolates. Curr HIV Res. 2007. 5(2):261-5.
  12. Veljkovic V, Veljkovic N, Esté JA, Hüther A, Dietrich U. Application of the EIIP/ISM bioinformatics concept in development of new drugs. Curr Med Chem. 2007. 14(4):441-53.
  13. Veljkovic V, Mouscadet JF, Veljkovic N, Glisic S, Debyser Z. Simple criterion for selection of flavonoid compounds with anti-HIV activity. Bioorg Med Chem Lett. 2007. 17(5):1226-32.
  14. Djordjevic A, Veljkovic M, Antoni S, Sakarellos-Daitsiotis M, Krikorian D, Zevgiti S, Dietrich U, Veljkovic N, Branch DR. The presence of antibodies recognizing a peptide derived from the second conserved region of HIV-1 gp120 correlates with non-progressive HIV infection. Curr HIV Res. 2007. 5(5):443-8.
  15. Raicevic S, Wright JV, Veljkovic V, Conca JL. Theoretical stability assessment of uranyl phosphates and apatites: selection of amendments for in situ remediation of uranium. Sci Total Environ. 2006. 355(1-3):13-24.
  16. Veljkovic N, Perovic V. In silico criterion for prediction of effects of p53 gene missense mutations on p53-Mdm2 feedback loop. Protein Pept Lett. 2006. 13(8):807-14.
  17. Veljkovic N, Branch DR, Metlas R, Prljic J, Manfredi R, Stringer WW, Veljkovic V. Antibodies reactive with C-terminus of the second conserved region of HIV-1gp120 as possible prognostic marker and therapeutic agent for HIV disease. J Clin Virol. 2004. 31 Suppl 1:S39-44.
  18. Veljkovic V, Prljic J, Veljkovic T. Safety and ethical consideration of AIDS vaccine. Int Rev Immunol. 2004. 23(5-6):465-86.
  19. Prljic J, Veljkovic N, Veljkovic V. Recombination property of the HIV-1 gp120 gene.  Int Rev Immunol. 2004. 23(5-6):447-54.
  20. Veljkovic V, Metlas R. Application of VIP/NTM-reactive natural antibodies in therapy of HIV disease. Int Rev Immunol. 2004. 23(5-6):437-45.
  21. Metlas R, Veljkovic V. HIV-1 gp120 and immune network. Int Rev Immunol. 2004. 23(5-6):413-22.
  22. Veljkovic V, Veljkovic N, Metlas R. Molecular makeup of HIV-1 envelope protein. Int Rev Immunol. 2004. 23(5-6):383-411.
  23. Veljkovic V, Köhler H, Müller S. AIDS vaccine: state of the art at the beginning of the third millennium.  Int Rev Immunol. 2004. 23(5-6):369-81.
  24. Ivanović V, Demajo M, Todorović-Raković N, Nikolić-Vukosavljević D, Nesković-Konstantinović Z, Krtolica K, Veljković V, Prljić J, Dimitrijević B. Localization of recognition site between transforming growth factor-beta1 (TGF-beta1) and TGF beta receptor type II: possible implications in breast cancer. Med Hypotheses. 2004. 62(5):727-32.
  25. Veljkovic N, Branch DR, Metlas R, Prljic J, Vlahovicek K, Pongor S, Veljkovic V. Design of peptide mimetics of HIV-1 gp120 for prevention and therapy of HIV disease. J Pept Res. 2003. 62(4):158-66.
  26. Veljkovic V, Müller S, Köhler H. AIDSVAX results: an important open question. Vaccine. 2003. 21(25-26):3528-9.
  27. Veljkovic V, Müller S, Köhler H. Does VaxGen hide the breakthrough infections? Lancet. 2003. 361(9370):1743-4.
  28. Veljkovic V, Metlas R, Köhler H, Urnovitz HB, Prljic J, Veljkovic N, Johnson E, Müller S. AIDS epidemic at the beginning of the third millennium: time for a new AIDS vaccine strategy. Vaccine. 2001. 19(15-16):1855-62.
  29. Veljkovic V, Metlas R, Jevtovic D, Stringer WW. The role of passive immunization in hiv-positive patients : a case report. Chest. 2001. 120(2):662-6.
  30. Prljić J, Veljković N, Doliana R, Colombatti A, Johnson E, Metlas R, Veljković V. Identification of an active Chi recombinational hot spot within the HIV-1 envelope gene: consequences for development of AIDS vaccines. Vaccine. 1999. 17(11-12):1462-7.
  31. Metlas R, Trajkovic D, Srdic T, Veljkovic V, Colombatti A. Anti-V3 and anti-IgG antibodies of healthy individuals share complementarity structures. J Acquir Immune Defic Syndr. 1999. 21(4):266-70.
  32. Metlas R, Trajkovic D, Srdic T, Veljkovic V, Colombatti A. Human immunodeficiency virus V3 peptide-reactive antibodies are present in normal HIV-negative sera. AIDS Res Hum Retroviruses. 1999. 15(7):671-7.
  33. Prljić J, Veljković N, Doliana R, Colombatti A, Johnson E, Metlas R, Veljković V. Identification of an active Chi recombinational hot spot within the HIV-1 envelope gene: consequences for development of AIDS vaccines. Vaccine. 1999. 17(11-12):1462-7.
  34. Veljković V, Johnson E, Metlas R. Molecular basis of the inefficacy and possible harmful effects of AIDS vaccine candidates based on HIV-1 envelope glycoprotein gp120. Vaccine. 1997. 15(5):473-4.
  35. Metlas R, Skerl V, Veljković V, Pongor S. Further evidence for the relationship of HIV-1 gp120 V3 loops with Ig superfamily members: similarity with the putative CDR3 region of T-cell receptor delta-chains. Immunol Lett. 1995. 47(1-2):25-8.
  36. Metlas R, Veljković V. Does the HIV-1 manipulate immune network via gp120 immunoglobulin-like domain involving V3 loop? Vaccine. 1995. 13(4):355-9.
  37. Metlas R, Skerl V, Pongor S, Colombatti A, Veljković V. Reactivity of AIDS patient sera with a peptide derived from HIV type 1NY5 glycoprotein 120 V3 loop and consensus sequence of collagens. AIDS Res Hum Retroviruses. 1994. 10(11):1425-6.
  38. Metlas R, Skerl V, Veljkovic V, Colombatti A, Pongor S. Immunoglobulin-like domain of HIV-1 envelope glycoprotein gp120 encodes putative internal image of some common human proteins. Viral Immunol. 1994. 7(4):215-9.
  39. Veljkovic V, Metlas R. Potentially negative effects of AIDS vaccines based on recombinant viruses carrying HIV-1 derived envelope gene. A warning on AIDS vaccine development. Vaccine. 1993. 11(3):291-2.
  40. Veljkovic V, Metlas R, Raspopovic J, Pongor S. Spectral and sequence similarity between vasoactive intestinal peptide and the second conserved region of human immunodeficiency virus type 1 envelope glycoprotein (gp120): possible consequences on prevention and therapy of AIDS. Biochem Biophys Res Commun. 1992. 189(2):705-10.
  41. Veljković V, Metlas R. HIV and idiotypic T-cell regulation: another view. Immunol Today. 1992. 13(1):38.
  42. Veljković V, Metlas R. Identification of immunoglobulin recombinant elements in human immunodeficiency virus type 1 envelope gene. Immunol Lett. 1992. 31(1):11-4.
  43. Metlas R, Veljkovic V, Paladini RD, Pongor S. Protein and DNA-sequence homologies between the V3-loop of human immunodeficiency virus type I envelope protein gp120 and immunoglobulin variable regions. Biochem Biophys Res Commun. 1991. 179(2):1056-62.
  44. Veljković V, Metlas R. Sequence similarity between human immunodeficiency virus type 1 envelope protein (gp120) and human proteins: a new hypothesis on protective antibody production. Immunol Lett. 1990. 26(2):193-5.
  45. Lalović D, Veljković V. The global average DNA base composition of coding regions may be determined by the electron-ion interaction potential. Biosystems. 1990. 23(4):311-6.
  46. Veljković V, Metlas R. Identification of nanopeptide from HTLV-III, ARV-2 and LAVBRU envelope gp120 determining binding to T4 cell surface protein. Cancer Biochem Biophys. 1988. 10(2):91-106.
  47. Veljković V, Cosić I.  A novel method of protein analysis for prediction of biological function: application to tumor toxins. Cancer Biochem Biophys. 1987. 9(2):139-48.
  48. Veljković V, Cosić I, Dimitrijević B, Lalović D. Is it possible to analyze DNA and protein sequences by the methods of digital signal processing? IEEE Trans Biomed Eng. 1985. 32(5):337-41.
  49. Vojvodic V, Veljkovic V, Cosic I, Lalovic D. Correlation between some physical parameters and alkaline hydrolysis rate constants of organophosphorous compounds. Arch Belg. 1984. Suppl:49-52.
  50. Veljković V, Vojvodić V. Theoretical possibilities of estimating the harmful effects of various chemicals on living organisms. Arh Hig Rada Toksikol. 1981. 32(4):311-9.
  51. Veljković V, Lalović DI. Correlation between the carcinogenicity of organic substances and their spectral characteristics. Experientia. 1978. 34(10):1342-3.
  52. Veljković V, Lalović DI. Simple theoretical criterion of chemical carcinogenicity. Experientia. 1977. 33(9):1228-9.
  53. Veljkovic V, Lalovic DI. Theoretical prediction of mutagenicity and carcinogenicity of chemical substances. Cancer Biochem Biophys. 1976. 1(6):295-8.